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DTSTART;TZID=America/New_York:20260206T140000
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CREATED:20260106T214423Z
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SUMMARY:PICS Colloquium: "Stochastic Reaction-Diffusion-Dynamics Modeling of whole systems: application to fibrin clot contraction and fibrin clot rupture" with Valeri Barsegov
DESCRIPTION:Abstract: Stochastic Reaction-Diffusion-Dynamics Model (SRDDM) for particle-based simulations of mechanochemical processes for thermodynamically large systems with high spatial and temporal resolution will be presented. The SRDDM couples the spatially inhomogeneous reaction-diffusion master equation to account for chemical reactions and molecular transport within the Langevin Dynamics (LD) framework to describe force-dependent dynamic processes at the whole system level (e.g. fibrin gel\, eukaryotic cell). This computational infrastructure developed allows for the simulation of hours of mechanical processes in reasonable wall-clock time. The SRDDM will be applied to explore: 1) the kinetics\, thermodynamics\, and mechanisms of blood clot contraction – platelet-driven fibrin network remodeling; and 2) the strength\, deformability\, damage and fracture toughness of fibrin clot – a prime example of fibrous material networks.
URL:https://seasevents.nmsdev7.com/event/pics-colloquium-stochastic-reaction-diffusion-dynamics-modeling-of-whole-systems-application-to-fibrin-clot-contraction-and-fibrin-clot-rupture-with-valeri-barsegov/
LOCATION:PICS Conference Room 534 – A Wing \, 5th Floor\, 3401 Walnut Street\, Philadelphia\, PA\, 19104\, United States
CATEGORIES:Seminar,Colloquium
ORGANIZER;CN="Penn Institute for Computational Science (PICS)":MAILTO:dkparks@seas.upenn.edu
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